Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Krt28A6BLY7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Krt28A6BLY7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Krt28A6BLY7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.32■■□□□ 1.64
Krt28A6BLY7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Krt28A6BLY7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Krt28A6BLY7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Krt28A6BLY7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Krt28A6BLY7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Krt28A6BLY7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Krt28A6BLY7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Krt28A6BLY7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.29■■□□□ 1.64
Krt28A6BLY7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Krt28A6BLY7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Krt28A6BLY7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Krt28A6BLY7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Krt28A6BLY7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Krt28A6BLY7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Krt28A6BLY7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.28■■□□□ 1.64
Krt28A6BLY7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Krt28A6BLY7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Krt28A6BLY7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Krt28A6BLY7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC25.27■■□□□ 1.64
Krt28A6BLY7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.26■■□□□ 1.63
Krt28A6BLY7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Krt28A6BLY7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC25.26■■□□□ 1.63
Krt28A6BLY7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Krt28A6BLY7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Krt28A6BLY7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Krt28A6BLY7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Krt28A6BLY7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Krt28A6BLY7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Krt28A6BLY7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Krt28A6BLY7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Krt28A6BLY7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC25.23■■□□□ 1.63
Krt28A6BLY7 Serp2-204ENSMUST00000228055 705 ntBASIC25.23■■□□□ 1.63
Krt28A6BLY7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Krt28A6BLY7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Krt28A6BLY7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Krt28A6BLY7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC25.22■■□□□ 1.63
Krt28A6BLY7 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.22■■□□□ 1.63
Krt28A6BLY7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Krt28A6BLY7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Krt28A6BLY7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Krt28A6BLY7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.21■■□□□ 1.63
Krt28A6BLY7 Gm13241-201ENSMUST00000094493 780 ntBASIC25.21■■□□□ 1.63
Krt28A6BLY7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Krt28A6BLY7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC25.2■■□□□ 1.62
Krt28A6BLY7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Krt28A6BLY7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Krt28A6BLY7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.19■■□□□ 1.62
Krt28A6BLY7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Krt28A6BLY7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Krt28A6BLY7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
Krt28A6BLY7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Krt28A6BLY7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Krt28A6BLY7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.18■■□□□ 1.62
Krt28A6BLY7 Gm7417-201ENSMUST00000192950 473 ntBASIC25.18■■□□□ 1.62
Krt28A6BLY7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Krt28A6BLY7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Krt28A6BLY7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC25.17■■□□□ 1.62
Krt28A6BLY7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Krt28A6BLY7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Krt28A6BLY7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Krt28A6BLY7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Krt28A6BLY7 Gm43034-201ENSMUST00000198678 1364 ntBASIC25.17■■□□□ 1.62
Krt28A6BLY7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Krt28A6BLY7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Krt28A6BLY7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Krt28A6BLY7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Krt28A6BLY7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.15■■□□□ 1.62
Krt28A6BLY7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Krt28A6BLY7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.62
Krt28A6BLY7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Krt28A6BLY7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC25.14■■□□□ 1.62
Krt28A6BLY7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.62
Krt28A6BLY7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Krt28A6BLY7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Krt28A6BLY7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Krt28A6BLY7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Krt28A6BLY7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Krt28A6BLY7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Krt28A6BLY7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Krt28A6BLY7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Krt28A6BLY7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Krt28A6BLY7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Krt28A6BLY7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Krt28A6BLY7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Krt28A6BLY7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Krt28A6BLY7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Krt28A6BLY7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Krt28A6BLY7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Krt28A6BLY7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Krt28A6BLY7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Krt28A6BLY7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Krt28A6BLY7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Krt28A6BLY7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Krt28A6BLY7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.09■■□□□ 1.61
Krt28A6BLY7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Krt28A6BLY7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms