Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.46■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv13-3A0A0B4J1H2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.44■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Notumos-201ENSMUST00000151998 2659 ntBASIC17.43■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Gm16148-201ENSMUST00000119653 893 ntBASIC17.43■□□□□ 0.38
Trbv13-3A0A0B4J1H2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv13-3A0A0B4J1H2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.43■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.42■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.42■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv13-3A0A0B4J1H2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.41■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv13-3A0A0B4J1H2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.4■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv13-3A0A0B4J1H2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trbv13-3A0A0B4J1H2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trbv13-3A0A0B4J1H2 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.38■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.37■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Gm24804-201ENSMUST00000174982 85 ntBASIC17.37■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.35■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv13-3A0A0B4J1H2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv13-3A0A0B4J1H2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.33■□□□□ 0.36
Trbv13-3A0A0B4J1H2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.32■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.32■□□□□ 0.36
Trbv13-3A0A0B4J1H2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv13-3A0A0B4J1H2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.32■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.31■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv13-3A0A0B4J1H2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.3■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.3■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.29■□□□□ 0.36
Trbv13-3A0A0B4J1H2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms