Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Sirpb1aA0A0A6YYP6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sirpb1aA0A0A6YYP6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sirpb1aA0A0A6YYP6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sirpb1aA0A0A6YYP6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Sirpb1aA0A0A6YYP6 Nkain2-201ENSMUST00000092602 558 ntBASIC21.1■□□□□ 0.97
Sirpb1aA0A0A6YYP6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sirpb1aA0A0A6YYP6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sirpb1aA0A0A6YYP6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.09■□□□□ 0.97
Sirpb1aA0A0A6YYP6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sirpb1aA0A0A6YYP6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Sirpb1aA0A0A6YYP6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sirpb1aA0A0A6YYP6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sirpb1aA0A0A6YYP6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sirpb1aA0A0A6YYP6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sirpb1aA0A0A6YYP6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.01■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sirpb1aA0A0A6YYP6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Sirpb1aA0A0A6YYP6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.96■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.96■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Sirpb1aA0A0A6YYP6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.95■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.95■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.95■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.94■□□□□ 0.94
Sirpb1aA0A0A6YYP6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.94■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.94■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.94■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.94■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.94■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.93■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.93■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.93■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sirpb1aA0A0A6YYP6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.92■□□□□ 0.94
Sirpb1aA0A0A6YYP6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms