Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbc1A0A0A6YWV4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trbc1A0A0A6YWV4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.43■□□□□ 0.86
Trbc1A0A0A6YWV4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbc1A0A0A6YWV4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.43■□□□□ 0.86
Trbc1A0A0A6YWV4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbc1A0A0A6YWV4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbc1A0A0A6YWV4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.42■□□□□ 0.86
Trbc1A0A0A6YWV4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trbc1A0A0A6YWV4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbc1A0A0A6YWV4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.42■□□□□ 0.86
Trbc1A0A0A6YWV4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbc1A0A0A6YWV4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbc1A0A0A6YWV4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbc1A0A0A6YWV4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trbc1A0A0A6YWV4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbc1A0A0A6YWV4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trbc1A0A0A6YWV4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trbc1A0A0A6YWV4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbc1A0A0A6YWV4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbc1A0A0A6YWV4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbc1A0A0A6YWV4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trbc1A0A0A6YWV4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trbc1A0A0A6YWV4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.4■□□□□ 0.86
Trbc1A0A0A6YWV4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trbc1A0A0A6YWV4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trbc1A0A0A6YWV4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trbc1A0A0A6YWV4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trbc1A0A0A6YWV4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trbc1A0A0A6YWV4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trbc1A0A0A6YWV4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trbc1A0A0A6YWV4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trbc1A0A0A6YWV4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.39■□□□□ 0.85
Trbc1A0A0A6YWV4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trbc1A0A0A6YWV4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbc1A0A0A6YWV4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trbc1A0A0A6YWV4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbc1A0A0A6YWV4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbc1A0A0A6YWV4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trbc1A0A0A6YWV4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbc1A0A0A6YWV4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbc1A0A0A6YWV4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.37■□□□□ 0.85
Trbc1A0A0A6YWV4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbc1A0A0A6YWV4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbc1A0A0A6YWV4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbc1A0A0A6YWV4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbc1A0A0A6YWV4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trbc1A0A0A6YWV4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trbc1A0A0A6YWV4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbc1A0A0A6YWV4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trbc1A0A0A6YWV4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trbc1A0A0A6YWV4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbc1A0A0A6YWV4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbc1A0A0A6YWV4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbc1A0A0A6YWV4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbc1A0A0A6YWV4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbc1A0A0A6YWV4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbc1A0A0A6YWV4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Trbc1A0A0A6YWV4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trbc1A0A0A6YWV4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbc1A0A0A6YWV4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trbc1A0A0A6YWV4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trbc1A0A0A6YWV4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbc1A0A0A6YWV4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbc1A0A0A6YWV4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.34■□□□□ 0.85
Trbc1A0A0A6YWV4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbc1A0A0A6YWV4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbc1A0A0A6YWV4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trbc1A0A0A6YWV4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trbc1A0A0A6YWV4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.33■□□□□ 0.85
Trbc1A0A0A6YWV4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.33■□□□□ 0.85
Trbc1A0A0A6YWV4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trbc1A0A0A6YWV4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Trbc1A0A0A6YWV4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.32■□□□□ 0.84
Trbc1A0A0A6YWV4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.32■□□□□ 0.84
Trbc1A0A0A6YWV4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trbc1A0A0A6YWV4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Trbc1A0A0A6YWV4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbc1A0A0A6YWV4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trbc1A0A0A6YWV4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.31■□□□□ 0.84
Trbc1A0A0A6YWV4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.31■□□□□ 0.84
Trbc1A0A0A6YWV4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbc1A0A0A6YWV4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbc1A0A0A6YWV4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Trbc1A0A0A6YWV4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbc1A0A0A6YWV4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbc1A0A0A6YWV4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trbc1A0A0A6YWV4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.3■□□□□ 0.84
Trbc1A0A0A6YWV4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbc1A0A0A6YWV4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trbc1A0A0A6YWV4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.29■□□□□ 0.84
Trbc1A0A0A6YWV4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.29■□□□□ 0.84
Trbc1A0A0A6YWV4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbc1A0A0A6YWV4 Cap2-205ENSMUST00000225824 1634 ntBASIC20.28■□□□□ 0.84
Trbc1A0A0A6YWV4 Gm44428-201ENSMUST00000204474 874 ntBASIC20.28■□□□□ 0.84
Trbc1A0A0A6YWV4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trbc1A0A0A6YWV4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbc1A0A0A6YWV4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trbc1A0A0A6YWV4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.28■□□□□ 0.84
Trbc1A0A0A6YWV4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms