Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
Trbv23A0A0A6YWQ1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv23A0A0A6YWQ1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Trbv23A0A0A6YWQ1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv23A0A0A6YWQ1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trbv23A0A0A6YWQ1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trbv23A0A0A6YWQ1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv23A0A0A6YWQ1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv23A0A0A6YWQ1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv23A0A0A6YWQ1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trbv23A0A0A6YWQ1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv23A0A0A6YWQ1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trbv23A0A0A6YWQ1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trbv23A0A0A6YWQ1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv23A0A0A6YWQ1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv23A0A0A6YWQ1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.12■□□□□ 0.65
Trbv23A0A0A6YWQ1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.12■□□□□ 0.65
Trbv23A0A0A6YWQ1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv23A0A0A6YWQ1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv23A0A0A6YWQ1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv23A0A0A6YWQ1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv23A0A0A6YWQ1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv23A0A0A6YWQ1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv23A0A0A6YWQ1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv23A0A0A6YWQ1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv23A0A0A6YWQ1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv23A0A0A6YWQ1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trbv23A0A0A6YWQ1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv23A0A0A6YWQ1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv23A0A0A6YWQ1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv23A0A0A6YWQ1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv23A0A0A6YWQ1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv23A0A0A6YWQ1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv23A0A0A6YWQ1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv23A0A0A6YWQ1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv23A0A0A6YWQ1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv23A0A0A6YWQ1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Trbv23A0A0A6YWQ1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Trbv23A0A0A6YWQ1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv23A0A0A6YWQ1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv23A0A0A6YWQ1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv23A0A0A6YWQ1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trbv23A0A0A6YWQ1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.06■□□□□ 0.64
Trbv23A0A0A6YWQ1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv23A0A0A6YWQ1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.05■□□□□ 0.64
Trbv23A0A0A6YWQ1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv23A0A0A6YWQ1 Gm8503-201ENSMUST00000118131 455 ntBASIC19.05■□□□□ 0.64
Trbv23A0A0A6YWQ1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.05■□□□□ 0.64
Trbv23A0A0A6YWQ1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.05■□□□□ 0.64
Trbv23A0A0A6YWQ1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.05■□□□□ 0.64
Trbv23A0A0A6YWQ1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv23A0A0A6YWQ1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv23A0A0A6YWQ1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trbv23A0A0A6YWQ1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv23A0A0A6YWQ1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv23A0A0A6YWQ1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.04■□□□□ 0.64
Trbv23A0A0A6YWQ1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.04■□□□□ 0.64
Trbv23A0A0A6YWQ1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv23A0A0A6YWQ1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.04■□□□□ 0.64
Trbv23A0A0A6YWQ1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv23A0A0A6YWQ1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.03■□□□□ 0.64
Trbv23A0A0A6YWQ1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trbv23A0A0A6YWQ1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv23A0A0A6YWQ1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trbv23A0A0A6YWQ1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv23A0A0A6YWQ1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv23A0A0A6YWQ1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.02■□□□□ 0.64
Trbv23A0A0A6YWQ1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv23A0A0A6YWQ1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv23A0A0A6YWQ1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv23A0A0A6YWQ1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trbv23A0A0A6YWQ1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trbv23A0A0A6YWQ1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trbv23A0A0A6YWQ1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv23A0A0A6YWQ1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv23A0A0A6YWQ1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv23A0A0A6YWQ1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv23A0A0A6YWQ1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv23A0A0A6YWQ1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19■□□□□ 0.63
Trbv23A0A0A6YWQ1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv23A0A0A6YWQ1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19■□□□□ 0.63
Trbv23A0A0A6YWQ1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv23A0A0A6YWQ1 Gm43006-201ENSMUST00000197702 1602 ntBASIC19■□□□□ 0.63
Trbv23A0A0A6YWQ1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trbv23A0A0A6YWQ1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv23A0A0A6YWQ1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv23A0A0A6YWQ1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv23A0A0A6YWQ1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv23A0A0A6YWQ1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.98■□□□□ 0.63
Trbv23A0A0A6YWQ1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv23A0A0A6YWQ1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv23A0A0A6YWQ1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trbv23A0A0A6YWQ1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv23A0A0A6YWQ1 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.97■□□□□ 0.63
Trbv23A0A0A6YWQ1 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.97■□□□□ 0.63
Trbv23A0A0A6YWQ1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv23A0A0A6YWQ1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv23A0A0A6YWQ1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv23A0A0A6YWQ1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv23A0A0A6YWQ1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms