Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Trav6n-6A0A075B6B2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6n-6A0A075B6B2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6n-6A0A075B6B2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6n-6A0A075B6B2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav6n-6A0A075B6B2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.49■□□□□ 0.23
Trav6n-6A0A075B6B2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6n-6A0A075B6B2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6n-6A0A075B6B2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6n-6A0A075B6B2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trav6n-6A0A075B6B2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav6n-6A0A075B6B2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6n-6A0A075B6B2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav6n-6A0A075B6B2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6n-6A0A075B6B2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6n-6A0A075B6B2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6n-6A0A075B6B2 Gm30023-201ENSMUST00000197970 889 ntBASIC16.48■□□□□ 0.23
Trav6n-6A0A075B6B2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav6n-6A0A075B6B2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6n-6A0A075B6B2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6n-6A0A075B6B2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6n-6A0A075B6B2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6n-6A0A075B6B2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trav6n-6A0A075B6B2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6n-6A0A075B6B2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6n-6A0A075B6B2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6n-6A0A075B6B2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6n-6A0A075B6B2 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.47■□□□□ 0.23
Trav6n-6A0A075B6B2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6n-6A0A075B6B2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6n-6A0A075B6B2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.46■□□□□ 0.23
Trav6n-6A0A075B6B2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6n-6A0A075B6B2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6n-6A0A075B6B2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6n-6A0A075B6B2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6n-6A0A075B6B2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav6n-6A0A075B6B2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6n-6A0A075B6B2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6n-6A0A075B6B2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6n-6A0A075B6B2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Trav6n-6A0A075B6B2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav6n-6A0A075B6B2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.45■□□□□ 0.22
Trav6n-6A0A075B6B2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6n-6A0A075B6B2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6n-6A0A075B6B2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav6n-6A0A075B6B2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6n-6A0A075B6B2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6n-6A0A075B6B2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-6A0A075B6B2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-6A0A075B6B2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-6A0A075B6B2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6n-6A0A075B6B2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-6A0A075B6B2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-6A0A075B6B2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-6A0A075B6B2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-6A0A075B6B2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6n-6A0A075B6B2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav6n-6A0A075B6B2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-6A0A075B6B2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-6A0A075B6B2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav6n-6A0A075B6B2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav6n-6A0A075B6B2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-6A0A075B6B2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-6A0A075B6B2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Trav6n-6A0A075B6B2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6n-6A0A075B6B2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-6A0A075B6B2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav6n-6A0A075B6B2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-6A0A075B6B2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-6A0A075B6B2 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.41■□□□□ 0.22
Trav6n-6A0A075B6B2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-6A0A075B6B2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-6A0A075B6B2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Trav6n-6A0A075B6B2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-6A0A075B6B2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-6A0A075B6B2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav6n-6A0A075B6B2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6n-6A0A075B6B2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-6A0A075B6B2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav6n-6A0A075B6B2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-6A0A075B6B2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav6n-6A0A075B6B2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-6A0A075B6B2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav6n-6A0A075B6B2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-6A0A075B6B2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-6A0A075B6B2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-6A0A075B6B2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav6n-6A0A075B6B2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6n-6A0A075B6B2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav6n-6A0A075B6B2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-6A0A075B6B2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-6A0A075B6B2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-6A0A075B6B2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6n-6A0A075B6B2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav6n-6A0A075B6B2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-6A0A075B6B2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-6A0A075B6B2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.38■□□□□ 0.21
Trav6n-6A0A075B6B2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-6A0A075B6B2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav6n-6A0A075B6B2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms