Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav12d-3A0A075B6A4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav12d-3A0A075B6A4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav12d-3A0A075B6A4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12d-3A0A075B6A4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12d-3A0A075B6A4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12d-3A0A075B6A4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12d-3A0A075B6A4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12d-3A0A075B6A4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav12d-3A0A075B6A4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12d-3A0A075B6A4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12d-3A0A075B6A4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12d-3A0A075B6A4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12d-3A0A075B6A4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12d-3A0A075B6A4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12d-3A0A075B6A4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12d-3A0A075B6A4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12d-3A0A075B6A4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12d-3A0A075B6A4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav12d-3A0A075B6A4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav12d-3A0A075B6A4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav12d-3A0A075B6A4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav12d-3A0A075B6A4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav12d-3A0A075B6A4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-3A0A075B6A4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-3A0A075B6A4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-3A0A075B6A4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12d-3A0A075B6A4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav12d-3A0A075B6A4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12d-3A0A075B6A4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12d-3A0A075B6A4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12d-3A0A075B6A4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav12d-3A0A075B6A4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12d-3A0A075B6A4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12d-3A0A075B6A4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav12d-3A0A075B6A4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12d-3A0A075B6A4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12d-3A0A075B6A4 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.71■□□□□ 0.27
Trav12d-3A0A075B6A4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12d-3A0A075B6A4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.7■□□□□ 0.26
Trav12d-3A0A075B6A4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12d-3A0A075B6A4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav12d-3A0A075B6A4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav12d-3A0A075B6A4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-3A0A075B6A4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.69■□□□□ 0.26
Trav12d-3A0A075B6A4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-3A0A075B6A4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-3A0A075B6A4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav12d-3A0A075B6A4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-3A0A075B6A4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12d-3A0A075B6A4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12d-3A0A075B6A4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12d-3A0A075B6A4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12d-3A0A075B6A4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.68■□□□□ 0.26
Trav12d-3A0A075B6A4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12d-3A0A075B6A4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav12d-3A0A075B6A4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12d-3A0A075B6A4 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.68■□□□□ 0.26
Trav12d-3A0A075B6A4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-3A0A075B6A4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-3A0A075B6A4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-3A0A075B6A4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-3A0A075B6A4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-3A0A075B6A4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Trav12d-3A0A075B6A4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-3A0A075B6A4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12d-3A0A075B6A4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12d-3A0A075B6A4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav12d-3A0A075B6A4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav12d-3A0A075B6A4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12d-3A0A075B6A4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trav12d-3A0A075B6A4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12d-3A0A075B6A4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12d-3A0A075B6A4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12d-3A0A075B6A4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12d-3A0A075B6A4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12d-3A0A075B6A4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12d-3A0A075B6A4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12d-3A0A075B6A4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav12d-3A0A075B6A4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12d-3A0A075B6A4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12d-3A0A075B6A4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12d-3A0A075B6A4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12d-3A0A075B6A4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12d-3A0A075B6A4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12d-3A0A075B6A4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12d-3A0A075B6A4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12d-3A0A075B6A4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12d-3A0A075B6A4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12d-3A0A075B6A4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12d-3A0A075B6A4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12d-3A0A075B6A4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12d-3A0A075B6A4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Trav12d-3A0A075B6A4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12d-3A0A075B6A4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12d-3A0A075B6A4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12d-3A0A075B6A4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.62■□□□□ 0.25
Trav12d-3A0A075B6A4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12d-3A0A075B6A4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav12d-3A0A075B6A4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms