Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav9d-3A0A075B695 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav9d-3A0A075B695 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav9d-3A0A075B695 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-3A0A075B695 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.81■□□□□ 0.12
Trav9d-3A0A075B695 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-3A0A075B695 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-3A0A075B695 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-3A0A075B695 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-3A0A075B695 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-3A0A075B695 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-3A0A075B695 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-3A0A075B695 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-3A0A075B695 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-3A0A075B695 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-3A0A075B695 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trav9d-3A0A075B695 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.79■□□□□ 0.12
Trav9d-3A0A075B695 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-3A0A075B695 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav9d-3A0A075B695 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-3A0A075B695 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-3A0A075B695 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-3A0A075B695 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-3A0A075B695 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-3A0A075B695 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-3A0A075B695 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav9d-3A0A075B695 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-3A0A075B695 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav9d-3A0A075B695 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-3A0A075B695 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-3A0A075B695 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-3A0A075B695 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav9d-3A0A075B695 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9d-3A0A075B695 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9d-3A0A075B695 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9d-3A0A075B695 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9d-3A0A075B695 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9d-3A0A075B695 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9d-3A0A075B695 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav9d-3A0A075B695 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9d-3A0A075B695 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-3A0A075B695 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.76■□□□□ 0.11
Trav9d-3A0A075B695 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav9d-3A0A075B695 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-3A0A075B695 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-3A0A075B695 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-3A0A075B695 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav9d-3A0A075B695 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-3A0A075B695 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav9d-3A0A075B695 Gm45364-201ENSMUST00000210883 159 ntBASIC15.75■□□□□ 0.11
Trav9d-3A0A075B695 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-3A0A075B695 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-3A0A075B695 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-3A0A075B695 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav9d-3A0A075B695 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-3A0A075B695 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-3A0A075B695 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-3A0A075B695 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.74■□□□□ 0.11
Trav9d-3A0A075B695 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-3A0A075B695 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-3A0A075B695 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-3A0A075B695 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav9d-3A0A075B695 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.74■□□□□ 0.11
Trav9d-3A0A075B695 Gm9812-201ENSMUST00000061934 968 ntBASIC15.74■□□□□ 0.11
Trav9d-3A0A075B695 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav9d-3A0A075B695 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-3A0A075B695 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav9d-3A0A075B695 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav9d-3A0A075B695 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-3A0A075B695 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-3A0A075B695 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-3A0A075B695 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-3A0A075B695 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-3A0A075B695 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-3A0A075B695 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-3A0A075B695 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav9d-3A0A075B695 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.72■□□□□ 0.11
Trav9d-3A0A075B695 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-3A0A075B695 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-3A0A075B695 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav9d-3A0A075B695 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-3A0A075B695 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-3A0A075B695 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-3A0A075B695 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav9d-3A0A075B695 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav9d-3A0A075B695 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.71■□□□□ 0.11
Trav9d-3A0A075B695 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-3A0A075B695 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-3A0A075B695 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav9d-3A0A075B695 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav9d-3A0A075B695 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-3A0A075B695 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Trav9d-3A0A075B695 Gm6311-201ENSMUST00000073790 878 ntBASIC15.7■□□□□ 0.1
Trav9d-3A0A075B695 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-3A0A075B695 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-3A0A075B695 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav9d-3A0A075B695 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.7■□□□□ 0.1
Trav9d-3A0A075B695 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-3A0A075B695 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9d-3A0A075B695 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms