Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav18A0A075B656 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav18A0A075B656 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trav18A0A075B656 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav18A0A075B656 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav18A0A075B656 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav18A0A075B656 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav18A0A075B656 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav18A0A075B656 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav18A0A075B656 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav18A0A075B656 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trav18A0A075B656 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav18A0A075B656 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav18A0A075B656 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav18A0A075B656 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav18A0A075B656 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav18A0A075B656 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav18A0A075B656 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav18A0A075B656 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav18A0A075B656 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.19■□□□□ 0.5
Trav18A0A075B656 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav18A0A075B656 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trav18A0A075B656 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav18A0A075B656 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav18A0A075B656 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trav18A0A075B656 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav18A0A075B656 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav18A0A075B656 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav18A0A075B656 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trav18A0A075B656 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav18A0A075B656 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav18A0A075B656 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav18A0A075B656 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav18A0A075B656 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.17■□□□□ 0.5
Trav18A0A075B656 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav18A0A075B656 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav18A0A075B656 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.17■□□□□ 0.5
Trav18A0A075B656 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav18A0A075B656 Gm4799-201ENSMUST00000095396 657 ntBASIC18.17■□□□□ 0.5
Trav18A0A075B656 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav18A0A075B656 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav18A0A075B656 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav18A0A075B656 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav18A0A075B656 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav18A0A075B656 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.16■□□□□ 0.5
Trav18A0A075B656 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav18A0A075B656 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trav18A0A075B656 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav18A0A075B656 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav18A0A075B656 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.15■□□□□ 0.5
Trav18A0A075B656 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav18A0A075B656 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav18A0A075B656 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.14■□□□□ 0.5
Trav18A0A075B656 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav18A0A075B656 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.14■□□□□ 0.49
Trav18A0A075B656 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.14■□□□□ 0.49
Trav18A0A075B656 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav18A0A075B656 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav18A0A075B656 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav18A0A075B656 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav18A0A075B656 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav18A0A075B656 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav18A0A075B656 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav18A0A075B656 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav18A0A075B656 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Trav18A0A075B656 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav18A0A075B656 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav18A0A075B656 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav18A0A075B656 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav18A0A075B656 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav18A0A075B656 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav18A0A075B656 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trav18A0A075B656 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav18A0A075B656 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav18A0A075B656 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.11■□□□□ 0.49
Trav18A0A075B656 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav18A0A075B656 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav18A0A075B656 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trav18A0A075B656 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav18A0A075B656 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav18A0A075B656 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav18A0A075B656 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav18A0A075B656 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav18A0A075B656 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trav18A0A075B656 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav18A0A075B656 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav18A0A075B656 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav18A0A075B656 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav18A0A075B656 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav18A0A075B656 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav18A0A075B656 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav18A0A075B656 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav18A0A075B656 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav18A0A075B656 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav18A0A075B656 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav18A0A075B656 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav18A0A075B656 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.08■□□□□ 0.48
Trav18A0A075B656 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav18A0A075B656 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav18A0A075B656 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms