Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav4-4-dv10A0A075B651 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav4-4-dv10A0A075B651 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav4-4-dv10A0A075B651 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav4-4-dv10A0A075B651 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav4-4-dv10A0A075B651 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav4-4-dv10A0A075B651 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav4-4-dv10A0A075B651 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav4-4-dv10A0A075B651 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav4-4-dv10A0A075B651 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav4-4-dv10A0A075B651 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav4-4-dv10A0A075B651 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav4-4-dv10A0A075B651 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.35■□□□□ 0.37
Trav4-4-dv10A0A075B651 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav4-4-dv10A0A075B651 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav4-4-dv10A0A075B651 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav4-4-dv10A0A075B651 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav4-4-dv10A0A075B651 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav4-4-dv10A0A075B651 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav4-4-dv10A0A075B651 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4-4-dv10A0A075B651 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4-4-dv10A0A075B651 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4-4-dv10A0A075B651 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav4-4-dv10A0A075B651 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trav4-4-dv10A0A075B651 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4-4-dv10A0A075B651 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4-4-dv10A0A075B651 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4-4-dv10A0A075B651 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4-4-dv10A0A075B651 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4-4-dv10A0A075B651 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4-4-dv10A0A075B651 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav4-4-dv10A0A075B651 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav4-4-dv10A0A075B651 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav4-4-dv10A0A075B651 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.33■□□□□ 0.36
Trav4-4-dv10A0A075B651 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-4-dv10A0A075B651 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-4-dv10A0A075B651 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-4-dv10A0A075B651 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav4-4-dv10A0A075B651 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-4-dv10A0A075B651 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav4-4-dv10A0A075B651 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav4-4-dv10A0A075B651 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav4-4-dv10A0A075B651 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.31■□□□□ 0.36
Trav4-4-dv10A0A075B651 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav4-4-dv10A0A075B651 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav4-4-dv10A0A075B651 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.31■□□□□ 0.36
Trav4-4-dv10A0A075B651 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.3■□□□□ 0.36
Trav4-4-dv10A0A075B651 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav4-4-dv10A0A075B651 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav4-4-dv10A0A075B651 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav4-4-dv10A0A075B651 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.3■□□□□ 0.36
Trav4-4-dv10A0A075B651 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav4-4-dv10A0A075B651 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav4-4-dv10A0A075B651 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav4-4-dv10A0A075B651 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav4-4-dv10A0A075B651 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav4-4-dv10A0A075B651 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav4-4-dv10A0A075B651 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav4-4-dv10A0A075B651 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav4-4-dv10A0A075B651 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav4-4-dv10A0A075B651 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav4-4-dv10A0A075B651 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-4-dv10A0A075B651 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-4-dv10A0A075B651 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-4-dv10A0A075B651 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-4-dv10A0A075B651 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Trav4-4-dv10A0A075B651 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-4-dv10A0A075B651 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav4-4-dv10A0A075B651 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-4-dv10A0A075B651 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-4-dv10A0A075B651 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-4-dv10A0A075B651 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-4-dv10A0A075B651 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav4-4-dv10A0A075B651 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav4-4-dv10A0A075B651 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav4-4-dv10A0A075B651 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav4-4-dv10A0A075B651 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav4-4-dv10A0A075B651 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.26■□□□□ 0.35
Trav4-4-dv10A0A075B651 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav4-4-dv10A0A075B651 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.26■□□□□ 0.35
Trav4-4-dv10A0A075B651 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav4-4-dv10A0A075B651 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav4-4-dv10A0A075B651 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.26■□□□□ 0.35
Trav4-4-dv10A0A075B651 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav4-4-dv10A0A075B651 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav4-4-dv10A0A075B651 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav4-4-dv10A0A075B651 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav4-4-dv10A0A075B651 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav4-4-dv10A0A075B651 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav4-4-dv10A0A075B651 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav4-4-dv10A0A075B651 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav4-4-dv10A0A075B651 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav4-4-dv10A0A075B651 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav4-4-dv10A0A075B651 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav4-4-dv10A0A075B651 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.24■□□□□ 0.35
Trav4-4-dv10A0A075B651 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav4-4-dv10A0A075B651 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav4-4-dv10A0A075B651 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav4-4-dv10A0A075B651 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms