Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18,21■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18,21■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18,21■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18,21■□□□□ 0,51
Trav15-2-dv6-2A0A075B650 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18,2■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18,2■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18,2■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18,2■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18,2■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18,2■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18,19■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Nkain2-201ENSMUST00000092602 558 ntBASIC18,19■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18,18■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18,18■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Dmtn-209ENSMUST00000228295 2572 ntBASIC18,18■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18,18■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18,17■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18,17■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18,17■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18,17■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18,17■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18,17■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18,17■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18,16■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18,16■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18,16■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18,16■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18,16■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18,16■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18,16■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18,16■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18,16■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18,15■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18,15■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18,15■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Gm26766-202ENSMUST00000227544 2347 ntBASIC18,15■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18,15■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18,15■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18,14■□□□□ 0,5
Trav15-2-dv6-2A0A075B650 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18,14■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18,14■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18,14■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18,14■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18,14■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18,14■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18,14■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18,14■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18,14■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18,14■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18,13■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18,13■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18,13■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18,13■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18,12■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18,12■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18,12■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18,12■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18,12■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18,12■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18,12■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18,12■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18,12■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18,11■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18,11■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18,11■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Gm13042-201ENSMUST00000119244 1955 ntBASIC18,11■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18,11■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18,1■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Gm6277-202ENSMUST00000224036 2779 ntBASIC18,1■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18,1■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18,1■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18,1■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18,09■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18,08■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18,08■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18,08■□□□□ 0,49
Trav15-2-dv6-2A0A075B650 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18,08■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18,08■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18,08■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18,08■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18,08■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18,07■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18,07■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18,07■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18,07■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18,07■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Gm42809-201ENSMUST00000198429 1138 ntBASIC18,07■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18,07■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18,07■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18,06■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18,06■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18,06■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18,06■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18,06■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18,06■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18,06■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18,06■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18,05■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18,05■□□□□ 0,48
Trav15-2-dv6-2A0A075B650 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18,05■□□□□ 0,48
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms