Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8-1A0A075B641 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8-1A0A075B641 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8-1A0A075B641 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav8-1A0A075B641 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8-1A0A075B641 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8-1A0A075B641 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav8-1A0A075B641 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8-1A0A075B641 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
Trav8-1A0A075B641 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8-1A0A075B641 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8-1A0A075B641 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav8-1A0A075B641 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8-1A0A075B641 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8-1A0A075B641 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.93■□□□□ 0.14
Trav8-1A0A075B641 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav8-1A0A075B641 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav8-1A0A075B641 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav8-1A0A075B641 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav8-1A0A075B641 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav8-1A0A075B641 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8-1A0A075B641 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8-1A0A075B641 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8-1A0A075B641 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8-1A0A075B641 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8-1A0A075B641 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8-1A0A075B641 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8-1A0A075B641 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8-1A0A075B641 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8-1A0A075B641 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8-1A0A075B641 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8-1A0A075B641 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav8-1A0A075B641 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8-1A0A075B641 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav8-1A0A075B641 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8-1A0A075B641 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav8-1A0A075B641 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8-1A0A075B641 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8-1A0A075B641 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8-1A0A075B641 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8-1A0A075B641 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8-1A0A075B641 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav8-1A0A075B641 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.89■□□□□ 0.13
Trav8-1A0A075B641 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav8-1A0A075B641 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8-1A0A075B641 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav8-1A0A075B641 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav8-1A0A075B641 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8-1A0A075B641 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8-1A0A075B641 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8-1A0A075B641 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav8-1A0A075B641 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8-1A0A075B641 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8-1A0A075B641 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8-1A0A075B641 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav8-1A0A075B641 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 Gm16148-201ENSMUST00000119653 893 ntBASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8-1A0A075B641 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8-1A0A075B641 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.85■□□□□ 0.13
Trav8-1A0A075B641 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8-1A0A075B641 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8-1A0A075B641 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8-1A0A075B641 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav8-1A0A075B641 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8-1A0A075B641 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8-1A0A075B641 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav8-1A0A075B641 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8-1A0A075B641 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8-1A0A075B641 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8-1A0A075B641 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8-1A0A075B641 Gm24804-201ENSMUST00000174982 85 ntBASIC15.84■□□□□ 0.13
Trav8-1A0A075B641 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav8-1A0A075B641 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav8-1A0A075B641 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.83■□□□□ 0.13
Trav8-1A0A075B641 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8-1A0A075B641 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav8-1A0A075B641 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8-1A0A075B641 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.83■□□□□ 0.12
Trav8-1A0A075B641 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.83■□□□□ 0.12
Trav8-1A0A075B641 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8-1A0A075B641 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8-1A0A075B641 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8-1A0A075B641 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8-1A0A075B641 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav8-1A0A075B641 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8-1A0A075B641 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.82■□□□□ 0.12
Trav8-1A0A075B641 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav8-1A0A075B641 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms