Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.87■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.84■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.84■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.84■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trav15d-1-dv6d-1A0A075B624 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.83■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.79■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms