Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Gm5786-201ENSMUST00000085368 882 ntBASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Gm14523-201ENSMUST00000117260 558 ntBASIC18.31■□□□□ 0.52
Trav7n-5A0A075B604 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7n-5A0A075B604 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.31■□□□□ 0.52
Trav7n-5A0A075B604 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7n-5A0A075B604 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7n-5A0A075B604 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Trav7n-5A0A075B604 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7n-5A0A075B604 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Trav7n-5A0A075B604 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7n-5A0A075B604 Gm27502-201ENSMUST00000183495 199 ntBASIC18.3■□□□□ 0.52
Trav7n-5A0A075B604 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7n-5A0A075B604 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7n-5A0A075B604 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7n-5A0A075B604 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7n-5A0A075B604 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7n-5A0A075B604 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7n-5A0A075B604 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7n-5A0A075B604 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7n-5A0A075B604 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7n-5A0A075B604 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.29■□□□□ 0.52
Trav7n-5A0A075B604 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7n-5A0A075B604 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trav7n-5A0A075B604 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7n-5A0A075B604 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav7n-5A0A075B604 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7n-5A0A075B604 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trav7n-5A0A075B604 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7n-5A0A075B604 Gm7332-201ENSMUST00000118351 454 ntBASIC18.28■□□□□ 0.52
Trav7n-5A0A075B604 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.28■□□□□ 0.52
Trav7n-5A0A075B604 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7n-5A0A075B604 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7n-5A0A075B604 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7n-5A0A075B604 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7n-5A0A075B604 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trav7n-5A0A075B604 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trav7n-5A0A075B604 Cap2-205ENSMUST00000225824 1634 ntBASIC18.27■□□□□ 0.52
Trav7n-5A0A075B604 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Trav7n-5A0A075B604 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7n-5A0A075B604 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.26■□□□□ 0.51
Trav7n-5A0A075B604 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7n-5A0A075B604 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7n-5A0A075B604 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7n-5A0A075B604 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7n-5A0A075B604 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7n-5A0A075B604 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7n-5A0A075B604 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7n-5A0A075B604 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7n-5A0A075B604 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.25■□□□□ 0.51
Trav7n-5A0A075B604 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trav7n-5A0A075B604 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav7n-5A0A075B604 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trav7n-5A0A075B604 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav7n-5A0A075B604 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trav7n-5A0A075B604 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav7n-5A0A075B604 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav7n-5A0A075B604 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav7n-5A0A075B604 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.23■□□□□ 0.51
Trav7n-5A0A075B604 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav7n-5A0A075B604 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.23■□□□□ 0.51
Trav7n-5A0A075B604 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7n-5A0A075B604 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav7n-5A0A075B604 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7n-5A0A075B604 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7n-5A0A075B604 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7n-5A0A075B604 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav7n-5A0A075B604 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7n-5A0A075B604 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trav7n-5A0A075B604 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7n-5A0A075B604 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7n-5A0A075B604 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7n-5A0A075B604 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7n-5A0A075B604 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7n-5A0A075B604 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav7n-5A0A075B604 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7n-5A0A075B604 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7n-5A0A075B604 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7n-5A0A075B604 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trav7n-5A0A075B604 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.19■□□□□ 0.5
Trav7n-5A0A075B604 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Trav7n-5A0A075B604 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7n-5A0A075B604 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7n-5A0A075B604 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trav7n-5A0A075B604 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7n-5A0A075B604 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7n-5A0A075B604 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trav7n-5A0A075B604 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Trav7n-5A0A075B604 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7n-5A0A075B604 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav7n-5A0A075B604 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav7n-5A0A075B604 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trav7n-5A0A075B604 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7n-5A0A075B604 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7n-5A0A075B604 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms