Protein–RNA interactions for Protein: A0A075B5L3

Igkv4-90, Immunoglobulin kappa chain variable 4-90 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-90A0A075B5L3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv4-90A0A075B5L3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.19■□□□□ 0.34
Igkv4-90A0A075B5L3 Terc-201ENSMUST00000082862 423 ntBASIC17.19■□□□□ 0.34
Igkv4-90A0A075B5L3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv4-90A0A075B5L3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv4-90A0A075B5L3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.19■□□□□ 0.34
Igkv4-90A0A075B5L3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv4-90A0A075B5L3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Igkv4-90A0A075B5L3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.18■□□□□ 0.34
Igkv4-90A0A075B5L3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.18■□□□□ 0.34
Igkv4-90A0A075B5L3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv4-90A0A075B5L3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv4-90A0A075B5L3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.18■□□□□ 0.34
Igkv4-90A0A075B5L3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv4-90A0A075B5L3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv4-90A0A075B5L3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv4-90A0A075B5L3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.17■□□□□ 0.34
Igkv4-90A0A075B5L3 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.17■□□□□ 0.34
Igkv4-90A0A075B5L3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv4-90A0A075B5L3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv4-90A0A075B5L3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv4-90A0A075B5L3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv4-90A0A075B5L3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv4-90A0A075B5L3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv4-90A0A075B5L3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv4-90A0A075B5L3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv4-90A0A075B5L3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv4-90A0A075B5L3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Igkv4-90A0A075B5L3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.16■□□□□ 0.34
Igkv4-90A0A075B5L3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv4-90A0A075B5L3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv4-90A0A075B5L3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv4-90A0A075B5L3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv4-90A0A075B5L3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Igkv4-90A0A075B5L3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv4-90A0A075B5L3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Igkv4-90A0A075B5L3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv4-90A0A075B5L3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv4-90A0A075B5L3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv4-90A0A075B5L3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-90A0A075B5L3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Igkv4-90A0A075B5L3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.13■□□□□ 0.33
Igkv4-90A0A075B5L3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-90A0A075B5L3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-90A0A075B5L3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Igkv4-90A0A075B5L3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-90A0A075B5L3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-90A0A075B5L3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Igkv4-90A0A075B5L3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-90A0A075B5L3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-90A0A075B5L3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-90A0A075B5L3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv4-90A0A075B5L3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Igkv4-90A0A075B5L3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv4-90A0A075B5L3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.12■□□□□ 0.33
Igkv4-90A0A075B5L3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.12■□□□□ 0.33
Igkv4-90A0A075B5L3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv4-90A0A075B5L3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv4-90A0A075B5L3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv4-90A0A075B5L3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.11■□□□□ 0.33
Igkv4-90A0A075B5L3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.11■□□□□ 0.33
Igkv4-90A0A075B5L3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Igkv4-90A0A075B5L3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv4-90A0A075B5L3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.1■□□□□ 0.33
Igkv4-90A0A075B5L3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv4-90A0A075B5L3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv4-90A0A075B5L3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Igkv4-90A0A075B5L3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv4-90A0A075B5L3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Igkv4-90A0A075B5L3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Igkv4-90A0A075B5L3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv4-90A0A075B5L3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv4-90A0A075B5L3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.08■□□□□ 0.33
Igkv4-90A0A075B5L3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Igkv4-90A0A075B5L3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Igkv4-90A0A075B5L3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Igkv4-90A0A075B5L3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv4-90A0A075B5L3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv4-90A0A075B5L3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv4-90A0A075B5L3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv4-90A0A075B5L3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv4-90A0A075B5L3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv4-90A0A075B5L3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv4-90A0A075B5L3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.08■□□□□ 0.32
Igkv4-90A0A075B5L3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv4-90A0A075B5L3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv4-90A0A075B5L3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv4-90A0A075B5L3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Igkv4-90A0A075B5L3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv4-90A0A075B5L3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv4-90A0A075B5L3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv4-90A0A075B5L3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv4-90A0A075B5L3 Gm6311-201ENSMUST00000073790 878 ntBASIC17.07■□□□□ 0.32
Igkv4-90A0A075B5L3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv4-90A0A075B5L3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv4-90A0A075B5L3 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.07■□□□□ 0.32
Igkv4-90A0A075B5L3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv4-90A0A075B5L3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv4-90A0A075B5L3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv4-90A0A075B5L3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms