Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip2Q9Z0H8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip2Q9Z0H8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip2Q9Z0H8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 Gm25925-201ENSMUST00000158314 306 ntBASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Clip2Q9Z0H8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Clip2Q9Z0H8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Clip2Q9Z0H8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clip2Q9Z0H8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clip2Q9Z0H8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clip2Q9Z0H8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Clip2Q9Z0H8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Clip2Q9Z0H8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Clip2Q9Z0H8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms