Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Gm27301-201ENSMUST00000184012 127 ntBASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rtn4rQ99PI8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Gm2272-201ENSMUST00000194903 582 ntBASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Gm20553-201ENSMUST00000204205 844 ntBASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rtn4rQ99PI8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Gm15427-201ENSMUST00000117288 531 ntBASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rtn4rQ99PI8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms