Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Thumpd1Q99J36 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Thumpd1Q99J36 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
Thumpd1Q99J36 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Thumpd1Q99J36 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Thumpd1Q99J36 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Thumpd1Q99J36 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Thumpd1Q99J36 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Thumpd1Q99J36 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.27□□□□□ -0.28
Thumpd1Q99J36 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thumpd1Q99J36 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Grk6-207ENSMUST00000225925 2769 ntBASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thumpd1Q99J36 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Thumpd1Q99J36 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Thumpd1Q99J36 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Thumpd1Q99J36 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Thumpd1Q99J36 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Thumpd1Q99J36 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Thumpd1Q99J36 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms