Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Gm5364-201ENSMUST00000216789 889 ntBASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb6Q91XZ4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Gm45747-201ENSMUST00000212203 999 ntBASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Gm10154-201ENSMUST00000084445 354 ntBASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb6Q91XZ4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb6Q91XZ4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb6Q91XZ4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb6Q91XZ4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb6Q91XZ4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb6Q91XZ4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb6Q91XZ4 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Gm13464-201ENSMUST00000119418 935 ntBASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Gm12134-201ENSMUST00000122109 520 ntBASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Gm23547-201ENSMUST00000158210 271 ntBASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb6Q91XZ4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Gm27301-201ENSMUST00000184012 127 ntBASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms