Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm7230-201ENSMUST00000173026 815 ntBASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Rps4l-201ENSMUST00000071745 943 ntBASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm1Q8VC85 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Gm6376-201ENSMUST00000209407 580 ntBASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Gm7787-201ENSMUST00000216858 688 ntBASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm1Q8VC85 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.27□□□□□ -0.12
Lsm1Q8VC85 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm1Q8VC85 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms