Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ddx54Q8K4L0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ddx54Q8K4L0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx54Q8K4L0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx54Q8K4L0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.33■□□□□ 0.69
Ddx54Q8K4L0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx54Q8K4L0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx54Q8K4L0 Mir1894-201ENSMUST00000122802 81 ntBASIC19.33■□□□□ 0.68
Ddx54Q8K4L0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Ddx54Q8K4L0 Gm18827-201ENSMUST00000188341 790 ntBASIC19.33■□□□□ 0.68
Ddx54Q8K4L0 Gm43179-201ENSMUST00000198797 275 ntBASIC19.33■□□□□ 0.68
Ddx54Q8K4L0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx54Q8K4L0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC19.33■□□□□ 0.68
Ddx54Q8K4L0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx54Q8K4L0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx54Q8K4L0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ddx54Q8K4L0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx54Q8K4L0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx54Q8K4L0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx54Q8K4L0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx54Q8K4L0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Gm45784-201ENSMUST00000188360 142 ntBASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 AA619741-201ENSMUST00000195095 646 ntBASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC19.32■□□□□ 0.68
Ddx54Q8K4L0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Gm15393-201ENSMUST00000120499 219 ntBASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Gm7558-201ENSMUST00000193221 1165 ntBASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Gm17794-201ENSMUST00000220252 955 ntBASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx54Q8K4L0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Gm12329-201ENSMUST00000120829 1007 ntBASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Snora78-201ENSMUST00000158630 128 ntBASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Gm9728-201ENSMUST00000200197 1055 ntBASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ddx54Q8K4L0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms