Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Clip4Q8CI96 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.03■□□□□ -0
Clip4Q8CI96 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Clip4Q8CI96 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Clip4Q8CI96 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.02■□□□□ -0
Clip4Q8CI96 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clip4Q8CI96 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.02■□□□□ -0
Clip4Q8CI96 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.02■□□□□ -0
Clip4Q8CI96 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.02■□□□□ -0
Clip4Q8CI96 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clip4Q8CI96 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clip4Q8CI96 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clip4Q8CI96 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clip4Q8CI96 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Clip4Q8CI96 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clip4Q8CI96 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clip4Q8CI96 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.02□□□□□ -0.01
Clip4Q8CI96 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Clip4Q8CI96 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.01□□□□□ -0.01
Clip4Q8CI96 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.01□□□□□ -0.01
Clip4Q8CI96 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.01□□□□□ -0.01
Clip4Q8CI96 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.01□□□□□ -0.01
Clip4Q8CI96 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.01□□□□□ -0.01
Clip4Q8CI96 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.01□□□□□ -0.01
Clip4Q8CI96 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.01□□□□□ -0.01
Clip4Q8CI96 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Clip4Q8CI96 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clip4Q8CI96 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.01□□□□□ -0.01
Clip4Q8CI96 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15□□□□□ -0.01
Clip4Q8CI96 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15□□□□□ -0.01
Clip4Q8CI96 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Clip4Q8CI96 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15□□□□□ -0.01
Clip4Q8CI96 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Clip4Q8CI96 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clip4Q8CI96 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms