Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Gm7222-201ENSMUST00000117512 906 ntBASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Gm11764-201ENSMUST00000120221 623 ntBASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Gm1401-201ENSMUST00000122048 772 ntBASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Gm5253-201ENSMUST00000187104 1025 ntBASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Vcpip1Q8CDG3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Gm11594-201ENSMUST00000122313 162 ntBASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Gm7230-201ENSMUST00000173026 815 ntBASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Gm8000-201ENSMUST00000188378 592 ntBASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.99■□□□□ 0.15
Vcpip1Q8CDG3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Gm9682-201ENSMUST00000197505 556 ntBASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.98■□□□□ 0.15
Vcpip1Q8CDG3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms