Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Gm27867-201ENSMUST00000184778 125 ntBASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim6Q8BGE7 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Gm7506-201ENSMUST00000207758 815 ntBASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim6Q8BGE7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Gm8655-201ENSMUST00000221159 852 ntBASIC15.81■□□□□ 0.12
Trim6Q8BGE7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim6Q8BGE7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms