Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Gm38294-201ENSMUST00000192831 381 ntBASIC17.18■□□□□ 0.34
Prpf40bQ80W14 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.18■□□□□ 0.34
Prpf40bQ80W14 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Sybu-209ENSMUST00000228639 4113 ntBASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Gm12008-201ENSMUST00000117791 755 ntBASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf40bQ80W14 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.16■□□□□ 0.34
Prpf40bQ80W14 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf40bQ80W14 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf40bQ80W14 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Prpf40bQ80W14 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.14■□□□□ 0.34
Prpf40bQ80W14 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms