Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-4Q5R1I0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Gm15483-201ENSMUST00000120338 456 ntBASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Gm43474-201ENSMUST00000196415 774 ntBASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Gm43125-201ENSMUST00000201724 730 ntBASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Gm5312-201ENSMUST00000203728 547 ntBASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-4Q5R1I0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms