Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Gm16061-201ENSMUST00000122167 857 ntBASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Gm11539-201ENSMUST00000119837 557 ntBASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-3Q5R1C3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms