Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Mir125a-201ENSMUST00000083545 68 ntBASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-2Q5R1B6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trav8d-2Q5R1B6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Gm2451-201ENSMUST00000199447 999 ntBASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Gm10290-201ENSMUST00000200451 999 ntBASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Gm43630-201ENSMUST00000201550 776 ntBASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-2Q5R1B6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Gm4984-201ENSMUST00000115987 360 ntBASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 AY702102-202ENSMUST00000194651 1173 ntBASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 AA619741-201ENSMUST00000195095 646 ntBASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Gm6007-201ENSMUST00000208170 823 ntBASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms