Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl21aP84444 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl21aP84444 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl21aP84444 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl21aP84444 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl21aP84444 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccl21aP84444 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ccl21aP84444 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccl21aP84444 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccl21aP84444 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccl21aP84444 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Gm15678-201ENSMUST00000117573 960 ntBASIC12.32□□□□□ -0.44
Ccl21aP84444 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccl21aP84444 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccl21aP84444 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.32□□□□□ -0.44
Ccl21aP84444 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.32□□□□□ -0.44
Ccl21aP84444 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccl21aP84444 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Rarb-207ENSMUST00000225921 2756 ntBASIC12.32□□□□□ -0.44
Ccl21aP84444 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.32□□□□□ -0.44
Ccl21aP84444 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Ccl21aP84444 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccl21aP84444 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl21aP84444 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccl21aP84444 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.31□□□□□ -0.44
Ccl21aP84444 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Ccl21aP84444 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccl21aP84444 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.31□□□□□ -0.44
Ccl21aP84444 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.31□□□□□ -0.44
Ccl21aP84444 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccl21aP84444 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccl21aP84444 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl21aP84444 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Ccl21aP84444 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccl21aP84444 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Gm12390-201ENSMUST00000117897 397 ntBASIC12.3□□□□□ -0.44
Ccl21aP84444 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccl21aP84444 Gm12341-201ENSMUST00000119724 503 ntBASIC12.3□□□□□ -0.44
Ccl21aP84444 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.3□□□□□ -0.44
Ccl21aP84444 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccl21aP84444 Gm5354-201ENSMUST00000182417 973 ntBASIC12.3□□□□□ -0.44
Ccl21aP84444 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccl21aP84444 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccl21aP84444 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.3□□□□□ -0.44
Ccl21aP84444 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Mir125a-201ENSMUST00000083545 68 ntBASIC12.3□□□□□ -0.44
Ccl21aP84444 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl21aP84444 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms