Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Six5P70178 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Six5P70178 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six5P70178 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.93□□□□□ -0.18
Six5P70178 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.93□□□□□ -0.18
Six5P70178 Gm5177-201ENSMUST00000183092 997 ntBASIC13.93□□□□□ -0.18
Six5P70178 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.93□□□□□ -0.18
Six5P70178 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.93□□□□□ -0.18
Six5P70178 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.93□□□□□ -0.18
Six5P70178 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six5P70178 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.93□□□□□ -0.18
Six5P70178 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six5P70178 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six5P70178 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six5P70178 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six5P70178 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six5P70178 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Six5P70178 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Six5P70178 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Six5P70178 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Six5P70178 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Six5P70178 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.92□□□□□ -0.18
Six5P70178 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.92□□□□□ -0.18
Six5P70178 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.92□□□□□ -0.18
Six5P70178 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Six5P70178 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
Six5P70178 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Gm6443-201ENSMUST00000203599 874 ntBASIC13.92□□□□□ -0.18
Six5P70178 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.92□□□□□ -0.18
Six5P70178 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Six5P70178 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.92□□□□□ -0.18
Six5P70178 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.92□□□□□ -0.18
Six5P70178 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Six5P70178 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Six5P70178 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Six5P70178 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Six5P70178 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Six5P70178 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.91□□□□□ -0.18
Six5P70178 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.91□□□□□ -0.18
Six5P70178 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Six5P70178 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Six5P70178 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Six5P70178 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six5P70178 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Six5P70178 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six5P70178 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Six5P70178 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six5P70178 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Six5P70178 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Six5P70178 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Six5P70178 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six5P70178 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six5P70178 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six5P70178 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six5P70178 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six5P70178 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Six5P70178 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms