Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Sec61a1P61620 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.13□□□□□ -0.31
Sec61a1P61620 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.13□□□□□ -0.31
Sec61a1P61620 Gm8097-201ENSMUST00000117903 829 ntBASIC13.13□□□□□ -0.31
Sec61a1P61620 Gm13418-201ENSMUST00000119097 944 ntBASIC13.13□□□□□ -0.31
Sec61a1P61620 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.13□□□□□ -0.31
Sec61a1P61620 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.13□□□□□ -0.31
Sec61a1P61620 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.13□□□□□ -0.31
Sec61a1P61620 Gm6257-201ENSMUST00000163864 910 ntBASIC13.13□□□□□ -0.31
Sec61a1P61620 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Sec61a1P61620 Mir6404-201ENSMUST00000183699 94 ntBASIC13.13□□□□□ -0.31
Sec61a1P61620 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.13□□□□□ -0.31
Sec61a1P61620 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.13□□□□□ -0.31
Sec61a1P61620 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.13□□□□□ -0.31
Sec61a1P61620 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sec61a1P61620 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.13□□□□□ -0.31
Sec61a1P61620 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Sec61a1P61620 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sec61a1P61620 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sec61a1P61620 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.12□□□□□ -0.31
Sec61a1P61620 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.12□□□□□ -0.31
Sec61a1P61620 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.12□□□□□ -0.31
Sec61a1P61620 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.12□□□□□ -0.31
Sec61a1P61620 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.12□□□□□ -0.31
Sec61a1P61620 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.12□□□□□ -0.31
Sec61a1P61620 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.12□□□□□ -0.31
Sec61a1P61620 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.12□□□□□ -0.31
Sec61a1P61620 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sec61a1P61620 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sec61a1P61620 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sec61a1P61620 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Sec61a1P61620 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sec61a1P61620 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a1P61620 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.11□□□□□ -0.31
Sec61a1P61620 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Gm12497-201ENSMUST00000138778 237 ntBASIC13.11□□□□□ -0.31
Sec61a1P61620 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.11□□□□□ -0.31
Sec61a1P61620 Mir5131-201ENSMUST00000175426 93 ntBASIC13.11□□□□□ -0.31
Sec61a1P61620 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.11□□□□□ -0.31
Sec61a1P61620 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sec61a1P61620 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Gm4535-201ENSMUST00000182274 558 ntBASIC13.11□□□□□ -0.31
Sec61a1P61620 Gm18195-201ENSMUST00000207604 706 ntBASIC13.11□□□□□ -0.31
Sec61a1P61620 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms