Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ube2d3P61079 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.68□□□□□ -0.7
Ube2d3P61079 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.68□□□□□ -0.7
Ube2d3P61079 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC10.68□□□□□ -0.7
Ube2d3P61079 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ube2d3P61079 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ube2d3P61079 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.68□□□□□ -0.7
Ube2d3P61079 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC10.68□□□□□ -0.7
Ube2d3P61079 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ube2d3P61079 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ube2d3P61079 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Ube2d3P61079 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
Ube2d3P61079 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ube2d3P61079 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.67□□□□□ -0.7
Ube2d3P61079 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ube2d3P61079 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Ube2d3P61079 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.67□□□□□ -0.7
Ube2d3P61079 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.67□□□□□ -0.7
Ube2d3P61079 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.67□□□□□ -0.7
Ube2d3P61079 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Ube2d3P61079 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.67□□□□□ -0.7
Ube2d3P61079 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.67□□□□□ -0.7
Ube2d3P61079 Rbfox2-207ENSMUST00000227533 1041 ntBASIC10.67□□□□□ -0.7
Ube2d3P61079 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.67□□□□□ -0.7
Ube2d3P61079 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.67□□□□□ -0.7
Ube2d3P61079 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.67□□□□□ -0.7
Ube2d3P61079 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ube2d3P61079 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.67□□□□□ -0.7
Ube2d3P61079 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.66□□□□□ -0.7
Ube2d3P61079 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ube2d3P61079 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ube2d3P61079 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Ube2d3P61079 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.66□□□□□ -0.7
Ube2d3P61079 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Ube2d3P61079 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ube2d3P61079 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Ube2d3P61079 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.66□□□□□ -0.7
Ube2d3P61079 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.66□□□□□ -0.7
Ube2d3P61079 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ube2d3P61079 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms