Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Sssca1P56873 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.05□□□□□ -0.48
Sssca1P56873 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.05□□□□□ -0.48
Sssca1P56873 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sssca1P56873 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sssca1P56873 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.05□□□□□ -0.48
Sssca1P56873 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sssca1P56873 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sssca1P56873 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.05□□□□□ -0.48
Sssca1P56873 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.05□□□□□ -0.48
Sssca1P56873 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.05□□□□□ -0.48
Sssca1P56873 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Sssca1P56873 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.05□□□□□ -0.48
Sssca1P56873 Gm15358-201ENSMUST00000119249 520 ntBASIC12.05□□□□□ -0.48
Sssca1P56873 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.05□□□□□ -0.48
Sssca1P56873 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.05□□□□□ -0.48
Sssca1P56873 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.05□□□□□ -0.48
Sssca1P56873 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.05□□□□□ -0.48
Sssca1P56873 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.05□□□□□ -0.48
Sssca1P56873 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Sssca1P56873 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.05□□□□□ -0.48
Sssca1P56873 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.05□□□□□ -0.48
Sssca1P56873 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sssca1P56873 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.04□□□□□ -0.48
Sssca1P56873 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sssca1P56873 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.04□□□□□ -0.48
Sssca1P56873 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.04□□□□□ -0.48
Sssca1P56873 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.04□□□□□ -0.48
Sssca1P56873 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sssca1P56873 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Sssca1P56873 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sssca1P56873 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.03□□□□□ -0.48
Sssca1P56873 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.03□□□□□ -0.48
Sssca1P56873 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.03□□□□□ -0.48
Sssca1P56873 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.03□□□□□ -0.48
Sssca1P56873 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sssca1P56873 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sssca1P56873 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sssca1P56873 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms