Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nek1P51954 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nek1P51954 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nek1P51954 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Nek1P51954 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nek1P51954 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nek1P51954 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nek1P51954 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nek1P51954 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.61■□□□□ 0.25
Nek1P51954 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nek1P51954 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nek1P51954 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.61■□□□□ 0.25
Nek1P51954 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nek1P51954 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.61■□□□□ 0.25
Nek1P51954 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nek1P51954 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.6■□□□□ 0.25
Nek1P51954 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Nek1P51954 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Nek1P51954 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Nek1P51954 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Gm25007-201ENSMUST00000083808 133 ntBASIC16.6■□□□□ 0.25
Nek1P51954 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.6■□□□□ 0.25
Nek1P51954 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.6■□□□□ 0.25
Nek1P51954 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.6■□□□□ 0.25
Nek1P51954 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nek1P51954 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Nek1P51954 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.59■□□□□ 0.25
Nek1P51954 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.59■□□□□ 0.25
Nek1P51954 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.59■□□□□ 0.25
Nek1P51954 Gm23935-201ENSMUST00000102303 57 ntBASIC16.59■□□□□ 0.25
Nek1P51954 Gm24270-201ENSMUST00000102326 57 ntBASIC16.59■□□□□ 0.25
Nek1P51954 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.59■□□□□ 0.25
Nek1P51954 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.59■□□□□ 0.25
Nek1P51954 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Gm24245-201ENSMUST00000157318 57 ntBASIC16.59■□□□□ 0.25
Nek1P51954 Gm43767-201ENSMUST00000198933 381 ntBASIC16.59■□□□□ 0.25
Nek1P51954 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.59■□□□□ 0.25
Nek1P51954 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Nek1P51954 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nek1P51954 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nek1P51954 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.58■□□□□ 0.25
Nek1P51954 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nek1P51954 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nek1P51954 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nek1P51954 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nek1P51954 Gm13036-201ENSMUST00000117799 748 ntBASIC16.58■□□□□ 0.24
Nek1P51954 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.58■□□□□ 0.24
Nek1P51954 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.58■□□□□ 0.24
Nek1P51954 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Nek1P51954 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.58■□□□□ 0.24
Nek1P51954 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms