Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Gm12008-201ENSMUST00000117791 755 ntBASIC12.36□□□□□ -0.43
Nkx2-1P50220 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.36□□□□□ -0.43
Nkx2-1P50220 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Gm19164-201ENSMUST00000210667 640 ntBASIC12.36□□□□□ -0.43
Nkx2-1P50220 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-1P50220 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-1P50220 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.35□□□□□ -0.43
Nkx2-1P50220 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.35□□□□□ -0.43
Nkx2-1P50220 Gm29518-201ENSMUST00000190858 372 ntBASIC12.35□□□□□ -0.43
Nkx2-1P50220 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.35□□□□□ -0.43
Nkx2-1P50220 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-1P50220 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms