Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.84□□□□□ -0.19
Hoxc5P32043 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc5P32043 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc5P32043 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc5P32043 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc5P32043 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc5P32043 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc5P32043 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc5P32043 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc5P32043 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hoxc5P32043 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Gm17971-201ENSMUST00000190239 806 ntBASIC13.83□□□□□ -0.2
Hoxc5P32043 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.83□□□□□ -0.2
Hoxc5P32043 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.83□□□□□ -0.2
Hoxc5P32043 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.83□□□□□ -0.2
Hoxc5P32043 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.83□□□□□ -0.2
Hoxc5P32043 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hoxc5P32043 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hoxc5P32043 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc5P32043 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Hoxc5P32043 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxc5P32043 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Hoxc5P32043 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Hoxc5P32043 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hoxc5P32043 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.82□□□□□ -0.2
Hoxc5P32043 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hoxc5P32043 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hoxc5P32043 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hoxc5P32043 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hoxc5P32043 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc5P32043 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc5P32043 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc5P32043 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc5P32043 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc5P32043 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.81□□□□□ -0.2
Hoxc5P32043 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc5P32043 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Hoxc5P32043 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc5P32043 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc5P32043 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.81□□□□□ -0.2
Hoxc5P32043 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc5P32043 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc5P32043 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc5P32043 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc5P32043 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc5P32043 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms