Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.25■□□□□ 0.35
Pde6aP27664 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Pde6aP27664 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6aP27664 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6aP27664 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pde6aP27664 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6aP27664 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6aP27664 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6aP27664 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6aP27664 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6aP27664 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.24■□□□□ 0.35
Pde6aP27664 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6aP27664 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.24■□□□□ 0.35
Pde6aP27664 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.24■□□□□ 0.35
Pde6aP27664 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.24■□□□□ 0.35
Pde6aP27664 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6aP27664 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.24■□□□□ 0.35
Pde6aP27664 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6aP27664 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Pde6aP27664 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6aP27664 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6aP27664 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6aP27664 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pde6aP27664 Gm6973-201ENSMUST00000117080 721 ntBASIC17.23■□□□□ 0.35
Pde6aP27664 Gm8749-201ENSMUST00000117737 331 ntBASIC17.23■□□□□ 0.35
Pde6aP27664 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.23■□□□□ 0.35
Pde6aP27664 Gm11745-201ENSMUST00000121669 448 ntBASIC17.23■□□□□ 0.35
Pde6aP27664 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Gm24513-201ENSMUST00000174964 138 ntBASIC17.23■□□□□ 0.35
Pde6aP27664 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.23■□□□□ 0.35
Pde6aP27664 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Pde6aP27664 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6aP27664 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pde6aP27664 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pde6aP27664 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.22■□□□□ 0.35
Pde6aP27664 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.22■□□□□ 0.35
Pde6aP27664 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.22■□□□□ 0.35
Pde6aP27664 Gm27397-201ENSMUST00000184997 107 ntBASIC17.22■□□□□ 0.35
Pde6aP27664 Gm37935-201ENSMUST00000192012 982 ntBASIC17.22■□□□□ 0.35
Pde6aP27664 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.22■□□□□ 0.35
Pde6aP27664 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pde6aP27664 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pde6aP27664 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6aP27664 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
Pde6aP27664 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Pde6aP27664 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pde6aP27664 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms