Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TP20293 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.04□□□□□ -0.16
TP20293 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TP20293 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TP20293 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TP20293 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.04□□□□□ -0.16
TP20293 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TP20293 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TP20293 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TP20293 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TP20293 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
TP20293 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.03□□□□□ -0.16
TP20293 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
TP20293 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.03□□□□□ -0.16
TP20293 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TP20293 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.03□□□□□ -0.16
TP20293 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.03□□□□□ -0.16
TP20293 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.03□□□□□ -0.16
TP20293 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TP20293 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TP20293 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TP20293 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TP20293 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TP20293 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TP20293 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TP20293 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.02□□□□□ -0.16
TP20293 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.02□□□□□ -0.16
TP20293 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TP20293 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.02□□□□□ -0.17
TP20293 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.02□□□□□ -0.17
TP20293 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.02□□□□□ -0.17
TP20293 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TP20293 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.02□□□□□ -0.17
TP20293 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TP20293 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TP20293 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TP20293 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TP20293 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TP20293 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TP20293 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TP20293 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TP20293 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TP20293 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TP20293 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
TP20293 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TP20293 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TP20293 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TP20293 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TP20293 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.01□□□□□ -0.17
TP20293 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.01□□□□□ -0.17
TP20293 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TP20293 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.01□□□□□ -0.17
TP20293 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Gm1401-201ENSMUST00000122048 772 ntBASIC14.01□□□□□ -0.17
TP20293 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.01□□□□□ -0.17
TP20293 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.01□□□□□ -0.17
TP20293 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.01□□□□□ -0.17
TP20293 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.01□□□□□ -0.17
TP20293 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TP20293 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms