Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.73□□□□□ -0.37
P04945 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
P04945 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
P04945 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.73□□□□□ -0.37
P04945 Gm13464-201ENSMUST00000119418 935 ntBASIC12.73□□□□□ -0.37
P04945 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.73□□□□□ -0.37
P04945 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.73□□□□□ -0.37
P04945 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.73□□□□□ -0.37
P04945 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.73□□□□□ -0.37
P04945 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.73□□□□□ -0.37
P04945 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.73□□□□□ -0.37
P04945 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
P04945 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.73□□□□□ -0.37
P04945 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04945 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.73□□□□□ -0.37
P04945 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.72□□□□□ -0.37
P04945 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.72□□□□□ -0.37
P04945 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P04945 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
P04945 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
P04945 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
P04945 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.72□□□□□ -0.37
P04945 Gm16026-204ENSMUST00000162652 683 ntBASIC12.72□□□□□ -0.37
P04945 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.72□□□□□ -0.37
P04945 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P04945 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.72□□□□□ -0.37
P04945 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
P04945 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
P04945 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
P04945 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P04945 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P04945 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.72□□□□□ -0.37
P04945 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P04945 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.72□□□□□ -0.37
P04945 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04945 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 Sybu-209ENSMUST00000228639 4113 ntBASIC12.71□□□□□ -0.37
P04945 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
P04945 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
P04945 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.71□□□□□ -0.37
P04945 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.71□□□□□ -0.37
P04945 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.71□□□□□ -0.37
P04945 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04945 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms