Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.19■□□□□ 0.18
P01734 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01734 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01734 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01734 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01734 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01734 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
P01734 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
P01734 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.18■□□□□ 0.18
P01734 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.18■□□□□ 0.18
P01734 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.18■□□□□ 0.18
P01734 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.18■□□□□ 0.18
P01734 Gm18889-201ENSMUST00000174284 929 ntBASIC16.18■□□□□ 0.18
P01734 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.18■□□□□ 0.18
P01734 Gm18057-201ENSMUST00000208220 503 ntBASIC16.18■□□□□ 0.18
P01734 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.18■□□□□ 0.18
P01734 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
P01734 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.18■□□□□ 0.18
P01734 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.18■□□□□ 0.18
P01734 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01734 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
P01734 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
P01734 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
P01734 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
P01734 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
P01734 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.17■□□□□ 0.18
P01734 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.17■□□□□ 0.18
P01734 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.17■□□□□ 0.18
P01734 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
P01734 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.17■□□□□ 0.18
P01734 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.17■□□□□ 0.18
P01734 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
P01734 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01734 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
P01734 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
P01734 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
P01734 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
P01734 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
P01734 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
P01734 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.16■□□□□ 0.18
P01734 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
P01734 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.16■□□□□ 0.18
P01734 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
P01734 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
P01734 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.16■□□□□ 0.18
P01734 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
P01734 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
P01734 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
P01734 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
P01734 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01734 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms