Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Slc4a4O88343 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.54■□□□□ 0.4
Slc4a4O88343 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.54■□□□□ 0.4
Slc4a4O88343 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Gm27920-201ENSMUST00000183953 96 ntBASIC17.54■□□□□ 0.4
Slc4a4O88343 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.54■□□□□ 0.4
Slc4a4O88343 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Slc4a4O88343 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slc4a4O88343 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.54■□□□□ 0.4
Slc4a4O88343 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.54■□□□□ 0.4
Slc4a4O88343 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc4a4O88343 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Slc4a4O88343 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Slc4a4O88343 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Slc4a4O88343 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Slc4a4O88343 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.53■□□□□ 0.4
Slc4a4O88343 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Slc4a4O88343 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.53■□□□□ 0.4
Slc4a4O88343 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc4a4O88343 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc4a4O88343 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc4a4O88343 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc4a4O88343 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Slc4a4O88343 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc4a4O88343 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc4a4O88343 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Slc4a4O88343 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc4a4O88343 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Slc4a4O88343 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc4a4O88343 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.52■□□□□ 0.4
Slc4a4O88343 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Slc4a4O88343 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc4a4O88343 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc4a4O88343 Gm2810-201ENSMUST00000118681 990 ntBASIC17.52■□□□□ 0.4
Slc4a4O88343 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.52■□□□□ 0.4
Slc4a4O88343 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.52■□□□□ 0.4
Slc4a4O88343 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc4a4O88343 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Slc4a4O88343 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Slc4a4O88343 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Slc4a4O88343 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc4a4O88343 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc4a4O88343 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc4a4O88343 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc4a4O88343 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc4a4O88343 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc4a4O88343 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc4a4O88343 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Slc4a4O88343 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc4a4O88343 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc4a4O88343 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Slc4a4O88343 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc4a4O88343 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc4a4O88343 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Slc4a4O88343 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.51■□□□□ 0.39
Slc4a4O88343 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc4a4O88343 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc4a4O88343 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Slc4a4O88343 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc4a4O88343 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc4a4O88343 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc4a4O88343 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc4a4O88343 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms