Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Gm10226O88253 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm10226O88253 Gm5479-201ENSMUST00000160578 435 ntBASIC11.46□□□□□ -0.57
Gm10226O88253 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.46□□□□□ -0.57
Gm10226O88253 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.46□□□□□ -0.57
Gm10226O88253 Gm24158-201ENSMUST00000175263 71 ntBASIC11.46□□□□□ -0.57
Gm10226O88253 Gm10253-201ENSMUST00000194270 940 ntBASIC11.46□□□□□ -0.57
Gm10226O88253 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm10226O88253 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm10226O88253 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm10226O88253 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm10226O88253 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Gm10226O88253 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Gm10226O88253 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm10226O88253 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm10226O88253 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm10226O88253 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Gm10226O88253 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm10226O88253 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Gm10226O88253 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Gm10226O88253 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Gm10226O88253 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm10226O88253 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Gm10226O88253 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm10226O88253 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm10226O88253 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm10226O88253 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm10226O88253 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gm10226O88253 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.45□□□□□ -0.58
Gm10226O88253 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Gm10226O88253 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.45□□□□□ -0.58
Gm10226O88253 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Gm10226O88253 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Gm10226O88253 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.45□□□□□ -0.58
Gm10226O88253 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.45□□□□□ -0.58
Gm10226O88253 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.45□□□□□ -0.58
Gm10226O88253 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.45□□□□□ -0.58
Gm10226O88253 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.45□□□□□ -0.58
Gm10226O88253 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.45□□□□□ -0.58
Gm10226O88253 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Gm10226O88253 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Gm10226O88253 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Gm10226O88253 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Gm10226O88253 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.45□□□□□ -0.58
Gm10226O88253 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm10226O88253 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Gm10226O88253 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Sybu-209ENSMUST00000228639 4113 ntBASIC11.44□□□□□ -0.58
Gm10226O88253 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Gm10226O88253 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Mir449b-201ENSMUST00000104833 80 ntBASIC11.44□□□□□ -0.58
Gm10226O88253 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.44□□□□□ -0.58
Gm10226O88253 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.44□□□□□ -0.58
Gm10226O88253 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Gm9726-201ENSMUST00000180321 678 ntBASIC11.44□□□□□ -0.58
Gm10226O88253 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.44□□□□□ -0.58
Gm10226O88253 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Gm7774-201ENSMUST00000200064 533 ntBASIC11.44□□□□□ -0.58
Gm10226O88253 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.44□□□□□ -0.58
Gm10226O88253 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Gm10226O88253 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Gm10226O88253 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm10226O88253 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms