Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1i3O35627 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nr1i3O35627 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16■□□□□ 0.15
Nr1i3O35627 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16■□□□□ 0.15
Nr1i3O35627 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1i3O35627 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16■□□□□ 0.15
Nr1i3O35627 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16■□□□□ 0.15
Nr1i3O35627 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16■□□□□ 0.15
Nr1i3O35627 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1i3O35627 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Nr1i3O35627 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1i3O35627 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Nr1i3O35627 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1i3O35627 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1i3O35627 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1i3O35627 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1i3O35627 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16■□□□□ 0.15
Nr1i3O35627 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Nr1i3O35627 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Nr1i3O35627 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Gm8749-201ENSMUST00000117737 331 ntBASIC15.99■□□□□ 0.15
Nr1i3O35627 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.99■□□□□ 0.15
Nr1i3O35627 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.99■□□□□ 0.15
Nr1i3O35627 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.99■□□□□ 0.15
Nr1i3O35627 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Nr1i3O35627 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.99■□□□□ 0.15
Nr1i3O35627 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Nr1i3O35627 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Nr1i3O35627 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1i3O35627 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.98■□□□□ 0.15
Nr1i3O35627 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Nr1i3O35627 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Gm7153-201ENSMUST00000117092 455 ntBASIC15.98■□□□□ 0.15
Nr1i3O35627 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.98■□□□□ 0.15
Nr1i3O35627 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Nr1i3O35627 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nr1i3O35627 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Gm10060-201ENSMUST00000212002 111 ntBASIC15.98■□□□□ 0.15
Nr1i3O35627 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nr1i3O35627 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nr1i3O35627 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1i3O35627 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Nr1i3O35627 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nr1i3O35627 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.97■□□□□ 0.15
Nr1i3O35627 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nr1i3O35627 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nr1i3O35627 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nr1i3O35627 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nr1i3O35627 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.97■□□□□ 0.15
Nr1i3O35627 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nr1i3O35627 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nr1i3O35627 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1i3O35627 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.97■□□□□ 0.15
Nr1i3O35627 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms