Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh17E9PXF0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 AA543401-201ENSMUST00000164248 1269 ntBASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Gm25948-201ENSMUST00000175334 112 ntBASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh17E9PXF0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh17E9PXF0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh17E9PXF0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Pcdh17E9PXF0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Pcdh17E9PXF0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh17E9PXF0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms