Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.21□□□□□ -0.29
Gm11127A7VMS2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm11127A7VMS2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm11127A7VMS2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm11127A7VMS2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm11127A7VMS2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm11127A7VMS2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm11127A7VMS2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm11127A7VMS2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Gm11127A7VMS2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm11127A7VMS2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm11127A7VMS2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Grk6-207ENSMUST00000225925 2769 ntBASIC13.2□□□□□ -0.3
Gm11127A7VMS2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Gm44454-201ENSMUST00000198541 138 ntBASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm11127A7VMS2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms