Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 AC125117.2-201ENSMUST00000228344 1140 ntBASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf225Q9D7D1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Gm14862-201ENSMUST00000115553 870 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Gm26474-201ENSMUST00000116762 122 ntBASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 AC153932.1-201ENSMUST00000218558 787 ntBASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf225Q9D7D1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Gm13033-201ENSMUST00000117591 1057 ntBASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Gm36966-201ENSMUST00000192217 413 ntBASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Gm37751-201ENSMUST00000192440 1198 ntBASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Gm19080-201ENSMUST00000196082 550 ntBASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Gm2651-201ENSMUST00000203560 838 ntBASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Vmn1r89-206ENSMUST00000227319 985 ntBASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.77■□□□□ 0.12
Rnf225Q9D7D1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf225Q9D7D1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf225Q9D7D1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf225Q9D7D1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf225Q9D7D1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf225Q9D7D1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf225Q9D7D1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf225Q9D7D1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf225Q9D7D1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.77■□□□□ 0.11
Rnf225Q9D7D1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf225Q9D7D1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf225Q9D7D1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rnf225Q9D7D1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms