Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Gm14722-201ENSMUST00000118943 689 ntBASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Gm11764-201ENSMUST00000120221 623 ntBASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Mir5126-201ENSMUST00000175513 77 ntBASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shmt2Q9CZN7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Gm37153-201ENSMUST00000193637 231 ntBASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shmt2Q9CZN7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Shmt2Q9CZN7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shmt2Q9CZN7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms