Protein–RNA interactions for Protein: Q91XY7

Pcdhga12, Protocadherin gamma A12, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga12Q91XY7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga12Q91XY7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga12Q91XY7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga12Q91XY7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Gm16198-201ENSMUST00000118766 670 ntBASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Gm10154-201ENSMUST00000084445 354 ntBASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga12Q91XY7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Gm23935-201ENSMUST00000102303 57 ntBASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Gm24270-201ENSMUST00000102326 57 ntBASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Gm24245-201ENSMUST00000157318 57 ntBASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Gm2272-201ENSMUST00000194903 582 ntBASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga12Q91XY7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhga12Q91XY7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga12Q91XY7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga12Q91XY7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga12Q91XY7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga12Q91XY7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga12Q91XY7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga12Q91XY7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga12Q91XY7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga12Q91XY7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga12Q91XY7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga12Q91XY7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga12Q91XY7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga12Q91XY7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga12Q91XY7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga12Q91XY7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga12Q91XY7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga12Q91XY7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga12Q91XY7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms