Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx1Q91VR5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Ddx1Q91VR5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx1Q91VR5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx1Q91VR5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.4■□□□□ 0.06
Ddx1Q91VR5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx1Q91VR5 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx1Q91VR5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx1Q91VR5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ddx1Q91VR5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx1Q91VR5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.39■□□□□ 0.05
Ddx1Q91VR5 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.39■□□□□ 0.05
Ddx1Q91VR5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx1Q91VR5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx1Q91VR5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx1Q91VR5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx1Q91VR5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ddx1Q91VR5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx1Q91VR5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx1Q91VR5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx1Q91VR5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.36■□□□□ 0.05
Ddx1Q91VR5 Gm13597-201ENSMUST00000121239 375 ntBASIC15.36■□□□□ 0.05
Ddx1Q91VR5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms