Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 AC022211.2-201ENST00000585075 2527 ntBASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 AC093010.1-201ENST00000473625 1624 ntBASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 AC009102.3-201ENST00000623118 1491 ntBASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 HMGA1P5-201ENST00000412453 271 ntBASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 AL512604.3-201ENST00000569583 964 ntBASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 FAM87A-204ENST00000613235 858 ntBASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.04■□□□□ -0
RTN4IP1Q8WWV3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 KRT8P7-201ENST00000533003 1432 ntBASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 HOXB1-202ENST00000577092 1414 ntBASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 AC145285.6-201ENST00000604632 637 ntBASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 AC073912.3-201ENST00000624414 853 ntBASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTN4IP1Q8WWV3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms